First, thanks to all of the Fanime volunteers and staff for making yet another fun and successful Fanime! I know a lot of hard work goes into Fanime, and I'm glad you are willing to listen to our feedback.
The Good:
Elevating the screens finally. I was able to see all the subtitles this year, without sitting on the back of my chair, or on my knees, or standing off to the side. I REALLY appreciated this.
Anime summaries outside all the doors. HUGE PLUS. Especially because we marked down several anime to see, but then when we were pressed for time, we couldn't remember which ones were the must-sees vs. the kinda-wanna-sees.
Good anime variety, and getting the schedules online out early so we could do research. Excellent job.
Bishie Bingo: a whole lot of fun. Was run well. Past years were kind of dragging, but this year it seemed to flow well, and move along nicely. (My one quibble would be the guys need to be on a stage like last year, since everyone ended up standing on chairs to get good views)
Artist's Alley: Seemed more full this year, and people had a lot of good art for sale.
The Bad:
The FMVs were huge letdown for the first time during my Fanime history (6 years). There were several things I didn't like about them. 1) No Civic Center, and crowded into a regular video room. 2) Bad acoustics and volume adjustment. Some of them were just too loud. I had my hands over my ears for a couple of them. 3) WAY too many action and drama AMVs. These are the finals! Limit them to 10 or less. And hardly any comedy AMVs. So I'm not sure if there was just a poor turnout in this category or what. If that's the case, please do not add on more AMVs to the action and drama to try and fill 3 hours. I would've much preferred a 2 hour FMV final with quality videos, than 3 hours of dragging on. 4) The voting sheets were terrible. In all past voting, we got a nice 8.5x11 sheet of paper with all the videos on it, and we just checked the one we liked the most. Here we had to write down all the numbers in the dark, try to remember which one we liked (after slogging through 20 action vids), sometimes changing our answer... it was just bad.
Dealers room seemed smaller... but maybe there were just less booths of stuff I was interested in. I noticed a lot of cat ear booths, which I'm not really interested in. I still got a decent haul of manga and pins, so I'm ok.

People need to be trained properly in computer usage for showing anime. In one case, the person didn't know how to work the Mac. My friend tried to help, but was brushed away. After the audience started yelling "FULL SCREEN!!" my friend's advice was finally taken. During the second anime, the audience had to walk him through, step by step, saying stuff like, "Open... Browse... Click..." He finally got it by the third episode. (EDIT: I see this was explained above, so nvm.)
Make sure all the anime works. I saw at least two anime cancelled due to corrupted files. (EDIT: ditto on the above edit comment)
I think that's about it. My only real disappointment was the FMV finals. I hope they improve next year. I still had a fabulous time with my friends, and am looking forward to year number seven!